Package: rarestR 1.1.0

Peng Zhao

rarestR: Rarefaction-Based Species Richness Estimator

Calculate rarefaction-based alpha- and beta-diversity. Offer parametric extrapolation to estimate the total expected species in a single community and the total expected shared species between two communities. Visualize the curve-fitting for these estimators.

Authors:Peng Zhao [aut, cre], Yi Zou [aut]

rarestR_1.1.0.tar.gz
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rarestR.pdf |rarestR.html✨
rarestR/json (API)

# Install 'rarestR' in R:
install.packages('rarestR', repos = c('https://pzhaonet.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/pzhaonet/rarestr/issues

Pkgdown site:https://pzhaonet.github.io

Datasets:
  • share - Dataset for rarestR.

On CRAN:

Conda:

biodiversityecology

4.89 score 2 stars 13 scripts 260 downloads 4 exports 2 dependencies

Last updated 4 months agofrom:30bde7479b. Checks:1 OK, 8 NOTE. Indexed: yes.

TargetResultLatest binary
Doc / VignettesOKMar 08 2025
R-4.5-winNOTEMar 08 2025
R-4.5-macNOTEMar 08 2025
R-4.5-linuxNOTEMar 08 2025
R-4.4-winNOTEMar 08 2025
R-4.4-macNOTEMar 08 2025
R-4.4-linuxNOTEMar 08 2025
R-4.3-winNOTEMar 08 2025
R-4.3-macNOTEMar 08 2025

Exports:esesstestess

Dependencies:rbibutilsRdpack

rarestR: An R package using rarefaction metrics to estimate α-diversity and β-diversity for incomplete samples

Rendered fromrarestR.Rmdusingknitr::rmarkdownon Mar 08 2025.

Last update: 2024-09-23
Started: 2024-08-23