Package: rarestR 1.1.0

Peng Zhao

rarestR: Rarefaction-Based Species Richness Estimator

Calculate rarefaction-based alpha- and beta-diversity. Offer parametric extrapolation to estimate the total expected species in a single community and the total expected shared species between two communities. Visualize the curve-fitting for these estimators.

Authors:Peng Zhao [aut, cre], Yi Zou [aut]

rarestR_1.1.0.tar.gz
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rarestR.pdf |rarestR.html✨
rarestR/json (API)

# Install 'rarestR' in R:
install.packages('rarestR', repos = c('https://pzhaonet.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/pzhaonet/rarestr/issues

Datasets:
  • share - Dataset for rarestR.

On CRAN:

biodiversityecology

4.59 score 1 stars 13 scripts 193 downloads 4 exports 2 dependencies

Last updated 15 days agofrom:30bde7479b. Checks:OK: 1 NOTE: 6. Indexed: yes.

TargetResultDate
Doc / VignettesOKNov 08 2024
R-4.5-winNOTENov 08 2024
R-4.5-linuxNOTENov 08 2024
R-4.4-winNOTENov 08 2024
R-4.4-macNOTENov 08 2024
R-4.3-winNOTENov 08 2024
R-4.3-macNOTENov 08 2024

Exports:esesstestess

Dependencies:rbibutilsRdpack

rarestR: An R package using rarefaction metrics to estimate α-diversity and β-diversity for incomplete samples

Rendered fromrarestR.Rmdusingknitr::rmarkdownon Nov 08 2024.

Last update: 2024-09-23
Started: 2024-08-23